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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
17
DNase-seq
4
ATAC-seq
1
FAIRE-seq
Assay category
84
DNA binding
22
DNA accessibility
Target of assay
74
histone
74
histone modification
45
broad histone mark
29
narrow histone mark
10
RNA binding protein
10
transcription factor
Date released
39
May, 2019
36
October, 2019
19
June, 2019
5
October, 2018
3
August, 2017
2
November, 2017
1
November, 2018
1
November, 2020
Available data
772
bam
718
bigWig
546
tsv
203
bed narrowPeak
106
bigBed narrowPeak
104
fastq
36
bed bed3+
28
tagAlign
22
bed broadPeak
21
bigBed broadPeak
6
bed bed3
4
bed bedMethyl
4
bed bedgraph
4
bigBed bedMethyl
3
bedpe bed3+
3
hic
2
hdf5
1
tar
Organism
106
Homo sapiens
Biosample type
72
tissue
31
primary cell
3
in vitro differentiated cells
Organ
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
106
AMP
Genome assembly (visualization)
104
hg19
102
GRCh38
Lab
106
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
106 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
+ See 3 more…
primary cell
endothelial cell of umbilical vein
10
2
1
cardiac fibroblast
3
3
mesenchymal stem cell
6
brain microvascular endothelial cell
2
1
brain pericyte
1
+ See 2 more…
in vitro differentiated cells
adipocyte
1
2
See all biosamples
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