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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
11
DNase-seq
2
ATAC-seq
1
FAIRE-seq
Assay category
75
DNA binding
14
DNA accessibility
Target of assay
66
histone
66
histone modification
41
broad histone mark
25
narrow histone mark
9
RNA binding protein
9
transcription factor
Date released
39
May, 2019
34
October, 2019
6
June, 2019
5
October, 2018
2
August, 2017
2
November, 2017
1
November, 2018
Available data
622
bam
575
bigWig
469
tsv
142
bed narrowPeak
89
bigBed narrowPeak
47
fastq
17
bed bed3+
16
bed broadPeak
15
bigBed broadPeak
14
tagAlign
3
bed bedMethyl
3
bedpe bed3+
3
bigBed bedMethyl
3
hic
2
hdf5
1
tar
Organism
89
Homo sapiens
Biosample type
72
tissue
17
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
89
AMP
Genome assembly (visualization)
88
hg19
87
GRCh38
Lab
89
AMP-T2D consortium
BIOSAMPLE
ASSAY
89 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
+ See 3 more…
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
See all biosamples
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