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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
22
DNase-seq
1
FAIRE-seq
Assay category
42
DNA binding
23
DNA accessibility
Target of assay
39
histone
39
histone modification
22
broad histone mark
17
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
25
May, 2019
20
June, 2019
11
November, 2017
6
October, 2017
2
November, 2018
1
July, 2019
Available data
159
bigWig
155
bam
141
bed narrowPeak
65
bigBed narrowPeak
43
tagAlign
37
bed broadPeak
28
bigBed broadPeak
25
bed bed3+
17
fastq
12
tsv
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
65
Homo sapiens
Biosample type
54
tissue
11
primary cell
Organ
354
liver
97
kidney
91
heart
89
pancreas
84
limb
82
vasculature
78
blood vessel
70
epithelium
65
brain
54
blood
54
bodily fluid
47
musculature of body
27
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
65
AMP
Genome assembly (visualization)
126
GRCh38
65
hg19
Lab
65
AMP-T2D consortium
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
6
14
temporal lobe
13
angular gyrus
12
frontal cortex
2
1
middle frontal area 46
2
+ See 4 more…
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
brain pericyte
1
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