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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
30
DNase-seq
3
Hi-C
Assay category
64
DNA binding
30
DNA accessibility
3
3D chromatin structure
Target of assay
56
histone
56
histone modification
34
broad histone mark
22
narrow histone mark
8
transcription factor
6
RNA binding protein
Date released
46
April, 2019
33
June, 2019
15
May, 2019
2
March, 2020
1
October, 2019
Available data
211
bam
184
bigWig
168
tsv
151
bed narrowPeak
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
97
Homo sapiens
Biosample type
91
tissue
6
primary cell
Organ
360
liver
127
brain
105
kidney
98
pancreas
97
heart
86
vasculature
84
limb
82
blood vessel
82
epithelium
54
blood
54
bodily fluid
49
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
15
vein
13
spleen
10
adipose tissue
6
eye
Project
97
AMP
Genome assembly (visualization)
94
GRCh38
94
hg19
Lab
97
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
97 results
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ChIP-seq
DNase-seq
Hi-C
tissue
heart left ventricle
28
3
1
heart
7
18
1
heart right ventricle
11
1
1
right atrium auricular region
7
2
coronary artery
3
2
+ See 2 more…
primary cell
cardiac fibroblast
3
3
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