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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
32
DNase-seq
Assay category
88
DNA binding
32
DNA accessibility
Target of assay
80
histone
80
histone modification
50
broad histone mark
30
narrow histone mark
8
transcription factor
6
RNA binding protein
Date released
46
April, 2019
33
June, 2019
26
October, 2019
15
May, 2019
Available data
253
bam
215
bigWig
178
bed narrowPeak
173
tsv
120
bigBed narrowPeak
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
120
Homo sapiens
Biosample type
114
tissue
6
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
120
AMP
Genome assembly (visualization)
120
GRCh38
117
hg19
Lab
120
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
120 results
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ChIP-seq
DNase-seq
tissue
heart left ventricle
28
3
tibial nerve
24
2
heart
7
18
heart right ventricle
11
1
right atrium auricular region
7
2
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primary cell
cardiac fibroblast
3
3
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