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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
7
DNase-seq
Assay category
43
DNA binding
7
DNA accessibility
Target of assay
38
histone
38
histone modification
22
broad histone mark
16
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
39
May, 2019
October, 2019
7
June, 2019
4
November, 2017
Available data
139
bam
119
bigWig
99
bed narrowPeak
68
tsv
50
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
9
bed bed3+
6
fastq
6
tagAlign
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
2
hic
Organism
50
Homo sapiens
Biosample type
42
tissue
8
primary cell
Organ
358
liver
127
brain
103
kidney
94
heart
84
pancreas
62
epithelium
54
blood
54
bodily fluid
50
vasculature
47
musculature of body
46
blood vessel
38
limb
25
connective tissue
18
ureter
13
spleen
9
adipose tissue
6
eye
5
artery
Project
50
AMP
Genome assembly (visualization)
50
GRCh38
49
hg19
Lab
50
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
50 results
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ChIP-seq
DNase-seq
tissue
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
primary cell
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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