Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
2
ChIP-seq
1
FAIRE-seq
Assay category
12
DNA accessibility
2
DNA binding
Target of assay
30
histone
histone modification
19
broad histone mark
11
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
7
June, 2019
5
October, 2019
May, 2019
2
November, 2017
Available data
100
bam
84
bigWig
68
tsv
64
bed narrowPeak
14
bigBed narrowPeak
13
bed bed3+
13
bed broadPeak
13
bigBed broadPeak
6
tagAlign
4
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
14
Homo sapiens
Biosample type
9
primary cell
5
tissue
Organ
323
liver
81
kidney
53
blood
53
bodily fluid
46
epithelium
42
pancreas
36
brain
36
heart
36
limb
33
musculature of body
19
connective tissue
18
ureter
14
vasculature
11
blood vessel
9
adipose tissue
7
spleen
5
eye
4
artery
3
vein
2
nerve
Project
14
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
May, 2019
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
Download