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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
7
DNase-seq
1
FAIRE-seq
Assay category
50
DNA binding
8
DNA accessibility
Target of assay
46
histone
46
histone modification
27
broad histone mark
19
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
36
May, 2019
13
October, 2019
5
June, 2019
4
November, 2017
Available data
83
bam
70
bigWig
59
bed narrowPeak
58
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
10
tsv
9
bed bed3+
6
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
58
Homo sapiens
Biosample type
37
tissue
21
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
58
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
58
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
artery
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
ascending aorta
13
1
thoracic aorta
12
aorta
11
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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