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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
67
DNA binding
10
DNA accessibility
Target of assay
64
histone
64
histone modification
41
broad histone mark
23
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
39
May, 2019
33
October, 2019
5
June, 2019
Available data
177
bam
146
bigWig
127
bed narrowPeak
77
bigBed narrowPeak
68
tsv
11
bed broadPeak
11
bigBed broadPeak
10
bed bed3+
6
tagAlign
3
hic
2
bedpe bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
tar
Organism
77
Homo sapiens
Biosample type
62
tissue
15
primary cell
Organ
358
liver
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
77
AMP
Genome assembly (visualization)
76
GRCh38
76
hg19
Lab
77
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
77 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
primary cell
endothelial cell of umbilical vein
10
2
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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