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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
44
DNase-seq
1
FAIRE-seq
Assay category
85
DNA binding
45
DNA accessibility
Target of assay
80
histone
80
histone modification
49
broad histone mark
31
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
48
June, 2019
45
May, 2019
33
October, 2019
4
November, 2017
Available data
242
bam
223
bigWig
193
bed narrowPeak
130
bigBed narrowPeak
77
tsv
63
bed broadPeak
50
bigBed broadPeak
47
bed bed3+
21
tagAlign
8
fastq
6
bed bedMethyl
6
bigBed bedMethyl
5
hic
4
bedpe bed3+
2
hdf5
1
tar
1
txt
Organism
130
Homo sapiens
Biosample type
100
tissue
30
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
130
AMP
Genome assembly (visualization)
129
hg19
128
GRCh38
Lab
130
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
BIOSAMPLE
ASSAY
130 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
muscle of leg
6
13
muscle of arm
17
ascending aorta
13
1
thoracic aorta
12
+ See 4 more…
primary cell
endothelial cell of umbilical vein
10
2
1
skeletal muscle satellite cell
7
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
skeletal muscle cell
1
1
+ See 2 more…
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