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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
310
ChIP-seq
Assay category
310
DNA binding
Target of assay
236
transcription factor
73
histone
73
histone modification
66
recombinant protein
45
broad histone mark
35
RNA binding protein
28
narrow histone mark
15
chromatin remodeller
2
other context
other post-translational modification
Date released
310
November, 2017
210
June, 2019
97
May, 2019
70
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
390
bam
332
bigWig
322
fastq
311
bed narrowPeak
310
bigBed narrowPeak
78
tagAlign
69
bed broadPeak
63
bigBed broadPeak
3
tar
Organism
310
Homo sapiens
Biosample type
247
cell line
57
tissue
6
primary cell
Organ
247
liver
63
brain
4
epithelium
4
vasculature
2
blood vessel
Project
310
AMP
Genome assembly (visualization)
278
GRCh38
256
hg19
Lab
310
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
19
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
310 results
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Clear Filters
ChIP-seq
cell line
HepG2
247
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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