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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
391
histone
391
histone modification
377
transcription factor
242
broad histone mark
149
narrow histone mark
91
RNA binding protein
recombinant protein
32
chromatin remodeller
5
other context
5
other post-translational modification
Date released
15
November, 2017
7
November, 2018
6
January, 2019
3
December, 2017
December, 2018
1
August, 2017
Available data
34
bam
34
bed narrowPeak
34
bigWig
34
fastq
32
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
28
cell line
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
23
liver
8
blood
8
bodily fluid
1
epithelium
Project
32
AMP
Genome assembly (visualization)
32
hg19
30
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
2
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
target.investigated_as!
recombinant protein
month_released!
December, 2018
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
cell line
HepG2
20
GM12878
8
tissue
liver
2
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
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