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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
193
ChIP-seq
Assay category
193
DNA binding
Target of assay
398
transcription factor
309
histone
309
histone modification
193
broad histone mark
116
narrow histone mark
86
RNA binding protein
81
recombinant protein
34
chromatin remodeller
5
other context
5
other post-translational modification
Date released
45
November, 2017
37
April, 2019
36
May, 2019
19
October, 2018
19
October, 2019
18
August, 2017
10
December, 2017
5
October, 2017
4
January, 2019
Available data
370
bigWig
365
bed narrowPeak
319
bam
193
bigBed narrowPeak
147
tagAlign
118
fastq
34
bed broadPeak
14
bigBed broadPeak
12
bed bed3+
Organism
189
Homo sapiens
Biosample type
168
tissue
10
cell line
8
primary cell
7
in vitro differentiated cells
Organ
58
brain
blood vessel
41
vasculature
34
heart
34
limb
30
pancreas
21
liver
16
nerve
14
artery
14
epithelium
12
kidney
5
vein
4
musculature of body
4
spleen
Project
193
AMP
Genome assembly (visualization)
193
GRCh38
157
hg19
Lab
193
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
8
inconsistent control read length
2
inconsistent assembly
audit.ERROR.category!
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
193 results
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ChIP-seq
tissue
tibial nerve
16
heart left ventricle
15
body of pancreas
11
kidney
10
layer of hippocampus
10
+ See 18 more…
cell line
HepG2
7
Panc1
3
primary cell
skeletal muscle myoblast
6
kidney epithelial cell
2
in vitro differentiated cells
hepatocyte
7
See all biosamples
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