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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
39
DNA binding
Target of assay
405
transcription factor
391
histone
391
histone modification
242
broad histone mark
149
narrow histone mark
93
RNA binding protein
81
recombinant protein
34
chromatin remodeller
5
other context
5
other post-translational modification
Date released
17
November, 2017
10
November, 2018
6
January, 2019
3
December, 2017
2
December, 2018
1
August, 2017
Available data
41
bam
41
bed narrowPeak
41
bigWig
41
fastq
39
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
Organism
39
Homo sapiens
Biosample type
32
cell line
5
tissue
1
in vitro differentiated cells
1
primary cell
Organ
25
liver
10
blood
10
bodily fluid
3
spleen
1
epithelium
Project
39
AMP
Genome assembly (visualization)
39
hg19
37
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
cell line
HepG2
22
GM12878
10
tissue
spleen
3
liver
2
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
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