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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
Assay category
115
DNA binding
Target of assay
405
transcription factor
391
histone
391
histone modification
242
broad histone mark
149
narrow histone mark
93
RNA binding protein
81
recombinant protein
34
chromatin remodeller
5
other context
5
other post-translational modification
Date released
81
November, 2017
22
November, 2018
6
January, 2019
3
December, 2017
2
December, 2018
1
August, 2017
Available data
125
bam
124
bed narrowPeak
124
bigWig
118
fastq
115
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
115
Homo sapiens
Biosample type
111
cell line
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
104
liver
10
blood
10
bodily fluid
1
epithelium
Project
115
AMP
Genome assembly (visualization)
113
GRCh38
112
hg19
Lab
115
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
12
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
115 results
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ChIP-seq
cell line
HepG2
101
GM12878
10
tissue
liver
2
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
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