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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
3
single cell RNA-seq
Assay category
18
DNA binding
3
Transcription
Target of assay
602
histone modification
601
histone
487
transcription factor
313
broad histone mark
287
narrow histone mark
106
RNA binding protein
88
recombinant protein
36
chromatin remodeller
21
control
5
other context
5
other post-translational modification
Date released
15
November, 2017
3
July, 2019
3
May, 2021
Available data
306
bam
168
fastq
tagAlign
23
bigWig
9
bed bed3+
3
tsv
Organism
21
Homo sapiens
Biosample type
12
cell line
9
primary cell
Organ
12
liver
6
brain
2
epithelium
2
vasculature
1
blood vessel
Project
21
AMP
Genome assembly (visualization)
21
hg19
3
GRCh38
Lab
18
AMP-T2D consortium
3
Kyle Gaulton, UCSD
assay_slims!
DNA accessibility
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
12
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
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