Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
WGBS
6
Hi-C
4
RRBS
Assay category
1548
DNA binding
1536
Transcription
396
DNA accessibility
29
DNA methylation
6
3D chromatin structure
Date released
12
July, 2019
8
August, 2017
7
November, 2018
6
February, 2021
1
December, 2018
1
October, 2019
Available data
41
zippedFastqFolder
36
bed bedMethyl
36
bigBed bedMethyl
23
hic
22
bigWig
22
fastq
20
bedpe bed3+
18
bam
6
tsv
5
bed bed3+
5
hdf5
3
cool
1
bedpe
Organism
35
Homo sapiens
Biosample type
21
tissue
11
primary cell
3
cell line
Organ
11
pancreas
8
epithelium
6
heart
5
liver
4
connective tissue
3
adipose tissue
3
blood vessel
3
brain
3
musculature of body
3
vasculature
2
spleen
1
limb
Project
29
AMP
6
HPAP
Genome assembly (visualization)
18
GRCh38
9
hg19
Lab
29
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
35 results
search-icon
table-tab-icon
Clear Filters
WGBS
Hi-C
RRBS
tissue
adipose tissue
3
body of pancreas
2
heart left ventricle
2
heart right ventricle
2
liver
1
1
+ See 7 more…
primary cell
pancreatic alpha cell
6
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
+ See 1 more…
cell line
HepG2
1
1
Panc1
1
See all biosamples
Download