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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
14
total RNA-seq
1
GRO-seq
Assay category
14
DNA binding
14
Transcription
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
10
February, 2018
8
August, 2021
8
December, 2017
2
May, 2021
1
January, 2018
Available data
36
bam
29
bigWig
27
fastq
14
bed narrowPeak
14
tsv
3
bed bed3+
Organism
29
Homo sapiens
Biosample type
21
in vitro differentiated cells
8
cell line
Organ
617
liver
615
pancreas
561
connective tissue
423
adipose tissue
284
epithelium
190
brain
154
heart
144
vasculature
141
blood vessel
81
artery
58
bone element
55
blood
55
bodily fluid
55
limb
52
kidney
35
musculature of body
29
embryo
29
nerve
15
spleen
13
vein
2
eye
1
pericardium
1
pituitary gland
Project
29
AMP
Genome assembly (visualization)
28
GRCh38
28
hg19
1
hg18
Lab
29
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
inconsistent control read length
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
12
4
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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