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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1350
ChIP-seq
1284
total RNA-seq
209
DNase-seq
136
ATAC-seq
100
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
FAIRE-seq
5
GRO-seq
5
Hi-C
Assay category
100
Transcription
5
DNA accessibility
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
5
July, 2019
3
August, 2018
3
June, 2018
1
August, 2017
1
November, 2018
1
October, 2019
Available data
205
tsv
130
fastq
105
bam
105
bigWig
52
zippedFastqFolder
13
txt
8
csv
5
bed narrowPeak
5
bigBed narrowPeak
1
tar
Organism
105
Homo sapiens
Biosample type
101
primary cell
4
tissue
Organ
76
pancreas
71
epithelium
4
brain
4
connective tissue
1
blood vessel
1
kidney
1
vasculature
1
vein
Project
105
AMP
Genome assembly (visualization)
105
hg19
100
GRCh38
Lab
105
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
105 results
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single cell RNA-seq
FAIRE-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 14 more…
tissue
frontal cortex
1
islet of Langerhans
1
kidney
1
pancreas
1
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