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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1350
ChIP-seq
1284
total RNA-seq
209
DNase-seq
136
ATAC-seq
100
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
FAIRE-seq
5
GRO-seq
5
Hi-C
Assay category
118
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
21
July, 2019
3
August, 2018
3
June, 2018
Available data
223
tsv
128
fastq
118
bam
118
bigWig
52
zippedFastqFolder
13
txt
8
csv
Organism
118
Homo sapiens
Biosample type
102
primary cell
16
tissue
Organ
76
pancreas
70
epithelium
7
brain
7
connective tissue
3
adipose tissue
3
liver
2
musculature of body
1
heart
1
kidney
Project
118
AMP
Genome assembly (visualization)
118
GRCh38
118
hg19
Lab
118
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
118 results
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single cell RNA-seq
small RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 15 more…
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 9 more…
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