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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
17
WGBS
16
DNase-seq
5
GRO-seq
2
ATAC-seq
Assay category
56
DNA binding
18
DNA accessibility
17
DNA methylation
Target of assay
52
histone
52
histone modification
36
broad histone mark
16
narrow histone mark
4
transcription factor
3
recombinant protein
1
RNA binding protein
Date released
53
November, 2017
16
June, 2019
9
July, 2019
9
November, 2018
5
January, 2018
2
August, 2017
1
August, 2021
1
October, 2017
Available data
359
bam
180
tsv
172
bed narrowPeak
167
fastq
159
tagAlign
157
txt
96
bigWig
72
bigBed narrowPeak
64
xls
17
bed bedMethyl
17
bed broadPeak
17
bigBed bedMethyl
16
bed bed3+
16
bigBed broadPeak
6
csv
2
bedpe bed3+
1
vcf
Organism
96
Homo sapiens
Biosample type
85
tissue
primary cell
5
cell line
5
in vitro differentiated cells
1
stem cell
Organ
63
brain
8
heart
6
pancreas
5
liver
2
adipose tissue
2
connective tissue
2
spleen
1
blood vessel
1
embryo
1
kidney
1
limb
1
musculature of body
1
vasculature
Project
96
AMP
Genome assembly (visualization)
hg19
2371
GRCh38
5
hg18
Lab
96
AMP-T2D consortium
assembly!
hg19
biosample_type!
primary cell
BIOSAMPLE
ASSAY
96 results
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Clear Filters
ChIP-seq
WGBS
DNase-seq
GRO-seq
ATAC-seq
tissue
layer of hippocampus
16
caudate nucleus
11
1
substantia nigra
10
middle frontal area 46
9
body of pancreas
2
2
+ See 23 more…
cell line
HepG2
4
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
neural progenitor cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
See all biosamples
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