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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
35
DNase-seq
4
total RNA-seq
2
ATAC-seq
1
WGBS
Assay category
48
DNA binding
37
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
14
narrow histone mark
Date released
52
October, 2019
31
June, 2019
6
May, 2019
1
July, 2019
Available data
113
bam
91
bed narrowPeak
90
bigWig
83
bigBed narrowPeak
35
bed bed3+
35
bed broadPeak
35
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
90
Homo sapiens
Biosample type
90
tissue
Organ
622
liver
570
pancreas
560
connective tissue
425
adipose tissue
244
epithelium
220
brain
180
heart
154
vasculature
150
blood vessel
116
kidney
90
limb
85
artery
60
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
25
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
90
AMP
Genome assembly (visualization)
89
GRCh38
89
hg19
Lab
90
AMP-T2D consortium
Audit category:
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BIOSAMPLE
ASSAY
90 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
6
12
1
muscle of arm
17
forelimb muscle
1
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