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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ATAC-seq
13
total RNA-seq
3
ChIP-seq
Assay category
24
DNA accessibility
13
Transcription
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
551
February, 2021
324
November, 2017
303
May, 2021
260
May, 2020
233
August, 2017
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
78
November, 2018
72
December, 2017
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
40
September, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
11
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
134
zippedFastqFolder
45
tsv
41
bed narrowPeak
40
bam
40
bigWig
24
fastq
12
bedpe bed3+
10
hic
7
txt
2
ibed
1
bed bed3+
Organism
40
Homo sapiens
Biosample type
31
tissue
7
cell line
2
in vitro differentiated cells
Organ
21
liver
10
pancreas
5
epithelium
2
heart
2
musculature of body
1
blood vessel
1
vasculature
Project
35
AMP
5
T1D
Genome assembly (visualization)
40
hg19
16
GRCh38
Lab
20
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
7
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
tissue
liver
20
1
islet of Langerhans
2
2
psoas muscle
2
aorta
1
heart left ventricle
1
+ See 2 more…
cell line
EndoC_BH1
2
2
1
early embryonic cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
See all biosamples
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