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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
ATAC-seq
1
WGBS
Assay category
27
DNA binding
6
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
27
histone
27
histone modification
16
broad histone mark
11
narrow histone mark
Date released
13
August, 2017
8
June, 2019
6
May, 2019
5
July, 2019
2
March, 2020
1
January, 2018
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
35
Homo sapiens
Biosample type
25
tissue
10
primary cell
Organ
606
pancreas
561
connective tissue
559
liver
423
adipose tissue
269
epithelium
194
heart
184
brain
138
vasculature
137
blood vessel
81
artery
58
bone element
55
blood
55
bodily fluid
55
limb
53
kidney
35
musculature of body
29
embryo
29
nerve
15
spleen
11
vein
2
eye
1
pericardium
1
pituitary gland
Project
35
AMP
Genome assembly (visualization)
34
hg19
20
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
award.project!
HPAP
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
ATAC-seq
WGBS
tissue
skeletal muscle tissue
13
1
1
1
muscle of leg
6
1
psoas muscle
2
primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
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