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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
8
WGBS
6
ATAC-seq
4
Hi-C
3
single cell RNA-seq
Assay category
65
Transcription
8
DNA methylation
6
DNA accessibility
4
3D chromatin structure
Target of assay
3
control
Date released
551
February, 2021
303
May, 2021
260
May, 2020
230
August, 2017
164
July, 2018
137
October, 2019
83
July, 2019
58
September, 2018
49
April, 2018
47
August, 2021
40
May, 2024
31
February, 2018
31
November, 2019
23
November, 2017
22
December, 2017
20
March, 2020
20
May, 2022
8
January, 2018
8
October, 2017
7
November, 2018
5
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
February, 2023
3
June, 2018
2
October, 2018
1
April, 2019
Available data
85
bigWig
82
bam
65
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
bigBed narrowPeak
Organism
83
Homo sapiens
Biosample type
61
tissue
22
primary cell
Organ
21
heart
17
connective tissue
15
brain
12
adipose tissue
10
blood vessel
10
vasculature
8
liver
7
epithelium
6
kidney
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
83
AMP
Genome assembly (visualization)
79
GRCh38
74
hg19
Lab
83
AMP-T2D consortium
award.project!
HPAP
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
83 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
+ See 20 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 14 more…
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