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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
ATAC-seq
1
WGBS
Assay category
13
DNA binding
6
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
13
August, 2017
5
July, 2019
2
March, 2020
1
January, 2018
Available data
68
bigWig
60
bed narrowPeak
57
bam
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
21
Homo sapiens
Biosample type
19
tissue
2
primary cell
Organ
542
connective tissue
522
pancreas
415
adipose tissue
264
liver
215
epithelium
130
heart
96
brain
72
vasculature
71
blood vessel
60
artery
58
bone element
29
embryo
27
kidney
21
musculature of body
7
limb
5
nerve
3
spleen
2
vein
1
blood
1
bodily fluid
1
pericardium
1
pituitary gland
Project
21
AMP
Genome assembly (visualization)
20
hg19
7
GRCh38
Lab
21
AMP-T2D consortium
award.project!
HPAP
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
ATAC-seq
WGBS
tissue
skeletal muscle tissue
13
1
1
1
psoas muscle
2
muscle of leg
1
primary cell
skeletal muscle satellite cell
1
1
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