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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
4
DNase-seq
2
ATAC-seq
2
total RNA-seq
Assay category
21
DNA binding
6
DNA accessibility
2
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
21
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
62
bed narrowPeak
36
bam
29
bigWig
25
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
29
Homo sapiens
Biosample type
cell line
27
tissue
2
primary cell
Organ
570
connective tissue
567
pancreas
425
adipose tissue
290
liver
251
epithelium
222
brain
168
heart
119
kidney
99
vasculature
94
blood vessel
91
limb
68
musculature of body
58
bone element
31
nerve
29
artery
21
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
29
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
29
AMP-T2D consortium
biosample_type!
cell line
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial artery
18
2
1
coronary artery
3
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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