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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
Assay category
37
DNA binding
Target of assay
356
transcription factor
88
recombinant protein
63
RNA binding protein
37
histone
37
histone modification
30
chromatin remodeller
19
narrow histone mark
18
broad histone mark
13
control
2
other context
2
other post-translational modification
Date released
15
November, 2017
10
November, 2019
6
October, 2019
3
August, 2021
1
January, 2019
1
March, 2020
1
May, 2021
Available data
37
bigWig
35
bam
35
bed narrowPeak
20
bigBed narrowPeak
16
fastq
14
bed broadPeak
14
bigBed broadPeak
11
tagAlign
Organism
37
Homo sapiens
Biosample type
487
tissue
230
primary cell
78
in vitro differentiated cells
37
cell line
2
stem cell
Organ
18
liver
18
pancreas
12
epithelium
1
blood
1
bodily fluid
Project
35
AMP
2
T1D
Genome assembly (visualization)
37
hg19
32
GRCh38
Lab
34
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
12
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
cell line
HepG2
18
EndoC_BH1
12
Panc1
6
GM12878
1
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