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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
25
ChIP-seq
2
ATAC-seq
Assay category
54
Transcription
25
DNA binding
2
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
56
February, 2021
19
October, 2019
3
July, 2019
3
May, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
58
tsv
25
bigBed narrowPeak
6
tagAlign
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
81
Homo sapiens
Biosample type
56
cell line
23
tissue
2
primary cell
Organ
611
liver
596
pancreas
551
connective tissue
419
adipose tissue
280
epithelium
187
brain
154
heart
142
vasculature
139
blood vessel
81
artery
58
bone element
55
blood
55
bodily fluid
55
limb
53
kidney
35
musculature of body
29
nerve
27
embryo
15
spleen
13
vein
2
eye
1
pericardium
1
pituitary gland
Project
81
AMP
Genome assembly (visualization)
81
GRCh38
81
hg19
Lab
81
AMP-T2D consortium
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
81 results
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total RNA-seq
ChIP-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
4
tissue
tibial artery
18
1
coronary artery
3
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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