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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
93
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
91
transcription factor
23
RNA binding protein
15
recombinant protein
9
chromatin remodeller
3
other context
3
other post-translational modification
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
123
fastq
121
bam
110
bigWig
103
bed narrowPeak
103
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
110
Homo sapiens
Biosample type
84
cell line
26
tissue
Organ
52
liver
39
blood
39
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
110
AMP
Genome assembly (visualization)
109
GRCh38
101
hg19
Lab
110
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
vcf
BIOSAMPLE
ASSAY
110 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
44
1
GM12878
39
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
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