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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
14
total RNA-seq
Assay category
14
DNA binding
14
Transcription
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
10
February, 2018
8
August, 2021
8
December, 2017
2
May, 2021
Available data
29
bam
28
bigWig
19
fastq
14
bed narrowPeak
14
tsv
3
bed bed3+
Organism
28
Homo sapiens
Biosample type
20
in vitro differentiated cells
8
cell line
Organ
616
liver
597
pancreas
567
connective tissue
423
adipose tissue
280
epithelium
173
heart
159
brain
152
vasculature
147
blood vessel
124
kidney
90
limb
85
artery
65
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
28
embryo
18
ureter
15
vein
14
spleen
6
eye
1
pericardium
1
pituitary gland
Project
28
AMP
Genome assembly (visualization)
28
GRCh38
28
hg19
1
hg18
Lab
28
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
inconsistent control read length
month_released!
March, 2020
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
12
4
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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