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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
5
total RNA-seq
3
ATAC-seq
Assay category
21
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
3
narrow histone mark
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
106
fastq
86
bed narrowPeak
30
bam
29
bigWig
21
bigBed narrowPeak
21
tsv
10
bed bed3
7
txt
4
bed bed3+
3
bed bedgraph
Organism
29
Homo sapiens
Biosample type
20
cell line
6
tissue
3
in vitro differentiated cells
Organ
15
blood
15
bodily fluid
6
spleen
5
liver
Project
29
AMP
Genome assembly (visualization)
29
hg19
26
GRCh38
Lab
26
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
month_released!
May, 2019
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
cell line
GM12878
15
HepG2
5
tissue
spleen
6
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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