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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
25
ChIP-seq
8
ATAC-seq
Assay category
195
DNA accessibility
25
DNA binding
Target of assay
25
histone
25
histone modification
13
broad histone mark
12
narrow histone mark
4
RNA binding protein
transcription factor
Date released
546
February, 2021
299
May, 2021
260
May, 2020
225
August, 2017
206
June, 2019
200
October, 2019
164
July, 2018
94
November, 2017
92
May, 2019
85
July, 2019
72
September, 2018
60
April, 2019
49
April, 2018
36
August, 2021
35
May, 2024
32
October, 2018
31
February, 2018
30
December, 2017
30
November, 2019
20
March, 2020
20
May, 2022
17
November, 2018
14
October, 2017
12
January, 2019
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
2
December, 2018
Available data
229
bam
220
bigWig
218
bed narrowPeak
212
bigBed narrowPeak
191
bed broadPeak
187
bed bed3+
187
bigBed broadPeak
17
fastq
14
tagAlign
Organism
220
Homo sapiens
Biosample type
177
tissue
43
primary cell
Organ
79
kidney
41
musculature of body
37
brain
32
heart
32
limb
18
ureter
16
epithelium
15
connective tissue
9
pancreas
7
vasculature
5
blood vessel
5
eye
2
adipose tissue
2
artery
2
liver
1
spleen
Project
220
AMP
Genome assembly (visualization)
220
GRCh38
196
hg19
Lab
219
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
20
inconsistent ontology term
Audit category:
3
missing controlled_by
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
220 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
brain
12
6
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 36 more…
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
2
cardiac muscle cell
1
1
epithelial cell of proximal tubule
1
1
+ See 17 more…
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