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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
ChIP-seq
15
total RNA-seq
2
ATAC-seq
Assay category
127
DNA binding
15
Transcription
2
DNA accessibility
Target of assay
111
histone
111
histone modification
66
broad histone mark
45
narrow histone mark
16
transcription factor
6
RNA binding protein
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
203
bed narrowPeak
169
bam
144
bigWig
123
tsv
97
bigBed narrowPeak
64
xls
57
txt
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
144
Homo sapiens
Biosample type
93
tissue
22
cell line
22
in vitro differentiated cells
7
primary cell
Organ
39
blood vessel
39
vasculature
25
brain
17
liver
15
heart
8
embryo
7
epithelium
6
limb
6
musculature of body
4
kidney
3
artery
2
connective tissue
1
pancreas
Project
144
AMP
Genome assembly (visualization)
143
hg19
127
GRCh38
Lab
128
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
144 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
tissue
ascending aorta
13
temporal lobe
13
angular gyrus
12
thoracic aorta
12
aorta
11
+ See 6 more…
cell line
HepG2
14
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
13
7
adipocyte
1
osteoblast
1
primary cell
kidney epithelial cell
4
hepatocyte
3
See all biosamples
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