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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
20
ATAC-seq
2
total RNA-seq
Assay category
45
DNA binding
20
DNA accessibility
2
Transcription
Target of assay
30
histone
30
histone modification
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
134
zippedFastqFolder
100
bam
84
fastq
83
bed narrowPeak
67
bigWig
45
bigBed narrowPeak
7
txt
2
tsv
1
bed bed3+
Organism
67
Homo sapiens
Biosample type
65
tissue
2
primary cell
Organ
42
pancreas
20
liver
5
adipose tissue
5
connective tissue
2
epithelium
Project
67
AMP
Genome assembly (visualization)
67
hg19
47
GRCh38
Lab
47
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
67 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
body of pancreas
25
liver
20
endocrine pancreas
14
omental fat pad
3
subcutaneous adipose tissue
2
+ See 1 more…
primary cell
pancreatic acinar cell
2
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