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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
379
ChIP-seq
2
total RNA-seq
Assay category
379
DNA binding
2
Transcription
Target of assay
255
transcription factor
105
histone
105
histone modification
66
recombinant protein
64
broad histone mark
46
RNA binding protein
41
narrow histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
468
bam
384
fastq
381
bigWig
358
bed narrowPeak
357
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
2
tsv
Organism
381
Homo sapiens
Biosample type
268
cell line
102
tissue
11
primary cell
Organ
268
liver
66
brain
42
pancreas
8
epithelium
6
vasculature
5
adipose tissue
5
connective tissue
3
blood vessel
Project
381
AMP
Genome assembly (visualization)
328
hg19
326
GRCh38
Lab
381
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
22
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
381 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
268
tissue
body of pancreas
25
layer of hippocampus
16
endocrine pancreas
14
caudate nucleus
12
middle frontal area 46
11
+ See 6 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
pancreatic acinar cell
2
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