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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
6
ChIP-seq
3
single cell RNA-seq
Assay category
8
DNA accessibility
6
DNA binding
3
Transcription
Target of assay
6
histone
6
histone modification
5
broad histone mark
1
narrow histone mark
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
20
fastq
18
bam
17
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
3
tsv
Organism
17
Homo sapiens
Biosample type
14
tissue
3
primary cell
Organ
7
brain
6
pancreas
1
adipose tissue
1
connective tissue
1
epithelium
1
spleen
Project
17
AMP
Genome assembly (visualization)
17
GRCh38
16
hg19
Lab
16
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
tissue
brain
6
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
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