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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
328
ChIP-seq
Assay category
328
DNA binding
Target of assay
238
transcription factor
73
histone
73
histone modification
66
recombinant protein
45
broad histone mark
33
RNA binding protein
28
narrow histone mark
15
chromatin remodeller
14
control
2
other context
2
other post-translational modification
Date released
525
February, 2021
328
November, 2017
294
May, 2021
260
May, 2020
255
August, 2017
192
June, 2019
182
October, 2019
131
July, 2018
93
May, 2019
80
November, 2018
78
July, 2019
65
April, 2019
56
December, 2017
45
October, 2018
44
August, 2021
31
February, 2018
30
December, 2018
26
January, 2019
20
May, 2022
19
November, 2019
16
April, 2018
15
March, 2020
14
October, 2017
11
September, 2018
8
January, 2018
5
November, 2020
3
February, 2023
2
June, 2018
Available data
386
bam
328
bigWig
318
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
3
tar
Organism
328
Homo sapiens
Biosample type
268
cell line
57
tissue
3
primary cell
Organ
268
liver
66
brain
epithelium
6
vasculature
3
blood vessel
Project
328
AMP
Genome assembly (visualization)
275
GRCh38
275
hg19
Lab
328
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
epithelium
BIOSAMPLE
ASSAY
328 results
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Clear Filters
ChIP-seq
cell line
HepG2
268
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
3
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