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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
Hi-C
1
FAIRE-seq
Assay category
3
DNA binding
2
3D chromatin structure
1
DNA accessibility
Target of assay
2
broad histone mark
2
histone
2
histone modification
1
control
Date released
3
October, 2019
2
July, 2019
1
November, 2017
Available data
28
bam
10
tsv
6
bigWig
3
hic
2
bed bed3+
2
bed broadPeak
2
bedpe bed3+
2
bigBed broadPeak
2
hdf5
2
tagAlign
1
bed narrowPeak
1
bigBed narrowPeak
1
fastq
1
tar
Organism
6
Homo sapiens
Biosample type
6
primary cell
Organ
94
liver
15
musculature of body
12
pancreas
9
epithelium
8
brain
8
connective tissue
7
vasculature
6
blood vessel
3
adipose tissue
3
vein
1
blood
1
bodily fluid
1
embryo
1
heart
1
kidney
1
limb
Project
6
AMP
Genome assembly (visualization)
148
hg19
GRCh38
Lab
6
AMP-T2D consortium
organ_slims!
pituitary gland
assembly!
GRCh38
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
1
endothelial cell of hepatic sinusoid
1
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