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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
4
total RNA-seq
2
ATAC-seq
2
DNase-seq
Assay category
78
DNA binding
4
DNA accessibility
4
Transcription
Target of assay
51
transcription factor
25
histone
25
histone modification
16
broad histone mark
10
RNA binding protein
10
chromatin remodeller
9
narrow histone mark
Date released
31
October, 2019
27
December, 2018
15
January, 2019
12
November, 2018
1
January, 2018
Available data
102
bam
86
bigWig
81
bed narrowPeak
80
bigBed narrowPeak
60
fastq
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
86
Homo sapiens
Biosample type
55
cell line
31
tissue
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
222
brain
184
heart
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
86
AMP
Genome assembly (visualization)
86
hg19
85
GRCh38
Lab
86
AMP-T2D consortium
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
86 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
cell line
GM12878
54
1
tissue
tibial nerve
24
4
1
2
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