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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
5
DNase-seq
3
Hi-C
3
single cell RNA-seq
Assay category
9
DNA binding
5
DNA accessibility
3
3D chromatin structure
3
Transcription
Target of assay
6
control
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
9
November, 2017
6
July, 2019
5
June, 2019
Available data
20
bigWig
17
bam
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
9
fastq
8
bed bed3+
3
hdf5
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
20
Homo sapiens
Biosample type
202
tissue
20
primary cell
Organ
231
epithelium
192
pancreas
32
connective tissue
29
vasculature
28
kidney
24
blood vessel
20
brain
15
vein
11
liver
11
musculature of body
10
heart
3
eye
2
adipose tissue
2
artery
1
pericardium
Project
20
AMP
Genome assembly (visualization)
20
hg19
14
GRCh38
Lab
20
AMP-T2D consortium
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
DNase-seq
Hi-C
single cell RNA-seq
primary cell
astrocyte of the cerebellum
3
1
1
brain microvascular endothelial cell
3
1
1
choroid plexus epithelial cell
3
1
brain pericyte
1
1
cerebellar granule cell
2
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