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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ATAC-seq
8
DNase-seq
Assay category
474
Transcription
66
DNA binding
17
DNA accessibility
2
DNA methylation
1
3D chromatin structure
Date released
5
June, 2019
3
October, 2019
2
August, 2017
2
August, 2021
1
February, 2021
1
January, 2018
1
November, 2018
1
November, 2020
1
October, 2017
Available data
17
bigWig
15
bed narrowPeak
12
bam
12
bigBed narrowPeak
9
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3
4
bed bedgraph
4
fastq
Organism
17
Homo sapiens
Biosample type
6
primary cell
6
tissue
5
in vitro differentiated cells
Organ
79
kidney
49
epithelium
49
pancreas
37
limb
35
brain
33
heart
33
musculature of body
26
liver
18
ureter
17
connective tissue
14
vasculature
13
blood vessel
6
adipose tissue
6
artery
4
eye
3
nerve
3
vein
2
spleen
1
blood
1
bodily fluid
Project
17
AMP
Genome assembly (visualization)
16
hg19
11
GRCh38
Lab
15
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
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BIOSAMPLE
ASSAY
17 results
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ATAC-seq
DNase-seq
primary cell
cardiac fibroblast
2
osteoblast
1
1
brain pericyte
1
hepatic stellate cell
1
tissue
omental fat pad
1
2
adipose tissue
2
subcutaneous adipose tissue
1
in vitro differentiated cells
adipocyte
3
1
osteoblast
1
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