Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
14
total RNA-seq
1
ATAC-seq
1
GRO-seq
Assay category
68
DNA binding
14
Transcription
1
DNA accessibility
Target of assay
54
transcription factor
12
histone
12
histone modification
10
RNA binding protein
10
chromatin remodeller
8
narrow histone mark
4
broad histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
10
February, 2018
8
August, 2021
8
December, 2017
2
January, 2018
2
May, 2021
Available data
96
bam
87
fastq
84
bigWig
68
bed narrowPeak
54
bigBed narrowPeak
14
tsv
3
bed bed3+
Organism
84
Homo sapiens
Biosample type
63
cell line
21
in vitro differentiated cells
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
222
brain
184
heart
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
84
AMP
Genome assembly (visualization)
83
hg19
82
GRCh38
1
hg18
Lab
84
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
1
inconsistent control
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
84 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
GRO-seq
cell line
GM12878
54
1
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
12
4
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
Download