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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
36
DNase-seq
4
total RNA-seq
2
ATAC-seq
Assay category
48
DNA binding
38
DNA accessibility
4
Transcription
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
14
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
May, 2019
Available data
113
bam
92
bed narrowPeak
90
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
Organism
90
Homo sapiens
Biosample type
90
tissue
Organ
621
liver
619
pancreas
568
connective tissue
423
adipose tissue
301
epithelium
222
brain
218
heart
154
vasculature
149
blood vessel
131
kidney
90
limb
85
artery
67
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
15
vein
14
spleen
6
eye
1
pericardium
1
pituitary gland
Project
90
AMP
Genome assembly (visualization)
90
hg19
89
GRCh38
Lab
90
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
90 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
6
13
muscle of arm
17
forelimb muscle
1
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