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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
ChIP-seq
38
DNase-seq
3
ATAC-seq
1
WGBS
Assay category
58
Transcription
41
DNA accessibility
1
DNA methylation
Date released
52
February, 2021
34
June, 2019
10
October, 2019
4
July, 2019
Available data
114
bam
100
bigWig
90
bed narrowPeak
64
tsv
38
bed bed3+
38
bed broadPeak
38
bigBed broadPeak
38
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
100
Homo sapiens
Biosample type
52
cell line
46
tissue
2
primary cell
Organ
495
connective tissue
462
pancreas
406
adipose tissue
200
epithelium
190
liver
110
heart
92
kidney
76
vasculature
74
blood vessel
60
artery
58
bone element
50
brain
43
limb
41
musculature of body
18
ureter
15
embryo
7
nerve
4
eye
4
spleen
3
vein
1
blood
1
bodily fluid
1
pericardium
Project
100
AMP
Genome assembly (visualization)
100
GRCh38
99
hg19
Lab
100
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
100 results
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total RNA-seq
DNase-seq
ATAC-seq
WGBS
cell line
smooth muscle cell of the coronary artery
52
tissue
muscle of arm
17
muscle of leg
13
1
tibial nerve
4
2
1
coronary artery
2
1
tibial artery
2
1
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primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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