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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
55
ChIP-seq
3
ATAC-seq
1
WGBS
Assay category
58
Transcription
55
DNA binding
3
DNA accessibility
1
DNA methylation
Target of assay
50
histone
50
histone modification
34
broad histone mark
16
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
56
February, 2021
48
October, 2019
9
May, 2019
4
July, 2019
Available data
190
bam
155
bigWig
145
bed narrowPeak
89
bigBed narrowPeak
64
tsv
38
bed bed3+
38
bed broadPeak
bigBed broadPeak
6
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
117
Homo sapiens
Biosample type
59
tissue
56
cell line
2
primary cell
Organ
616
pancreas
561
connective tissue
559
liver
423
adipose tissue
279
epithelium
194
heart
184
brain
138
vasculature
137
blood vessel
81
artery
58
bone element
55
blood
55
bodily fluid
55
limb
53
kidney
35
musculature of body
29
embryo
29
nerve
15
spleen
11
vein
2
eye
1
pericardium
1
pituitary gland
Project
117
AMP
Genome assembly (visualization)
116
GRCh38
116
hg19
Lab
117
AMP-T2D consortium
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
117 results
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total RNA-seq
ChIP-seq
ATAC-seq
WGBS
tissue
tibial nerve
4
24
1
tibial artery
18
1
muscle of leg
6
1
coronary artery
3
1
cell line
smooth muscle cell of the coronary artery
52
4
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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