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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
30
ChIP-seq
4
total RNA-seq
1
ATAC-seq
1
WGBS
Assay category
35
DNA accessibility
30
DNA binding
4
Transcription
1
DNA methylation
Target of assay
30
histone
30
histone modification
20
broad histone mark
10
narrow histone mark
Date released
32
June, 2019
31
October, 2019
6
May, 2019
1
July, 2019
Available data
88
bam
71
bed narrowPeak
70
bigWig
64
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
70
Homo sapiens
Biosample type
70
tissue
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
222
brain
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
70
AMP
Genome assembly (visualization)
69
GRCh38
69
hg19
Lab
70
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
70 results
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DNase-seq
ChIP-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
2
24
4
1
muscle of leg
13
6
1
muscle of arm
17
forelimb muscle
1
hindlimb muscle
1
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