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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
37
DNase-seq
4
total RNA-seq
3
ATAC-seq
3
WGBS
Assay category
60
DNA binding
40
DNA accessibility
4
Transcription
3
DNA methylation
Target of assay
54
histone
54
histone modification
38
broad histone mark
16
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
52
October, 2019
32
June, 2019
6
January, 2019
6
May, 2019
6
November, 2018
3
December, 2018
1
July, 2019
1
October, 2017
Available data
138
bam
107
bigWig
106
bed narrowPeak
97
bigBed narrowPeak
37
bed bed3+
37
bed broadPeak
37
bigBed broadPeak
24
fastq
8
tsv
3
bed bedMethyl
3
bigBed bedMethyl
Organism
107
Homo sapiens
Biosample type
107
tissue
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
222
brain
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
107
AMP
Genome assembly (visualization)
106
GRCh38
104
hg19
Lab
107
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
107 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
6
13
1
muscle of arm
17
spleen
12
1
1
2
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