Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
37
ChIP-seq
6
DNase-seq
2
ATAC-seq
1
FAIRE-seq
Assay category
54
Transcription
37
DNA binding
9
DNA accessibility
Target of assay
32
histone
32
histone modification
21
broad histone mark
11
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
56
February, 2021
36
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
122
bam
100
bigWig
87
bed narrowPeak
58
tsv
38
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
6
tagAlign
2
hic
1
bedpe bed3+
1
tar
Organism
100
Homo sapiens
Biosample type
56
cell line
27
tissue
17
primary cell
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
222
brain
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
100
AMP
Genome assembly (visualization)
100
hg19
97
GRCh38
Lab
100
AMP-T2D consortium
BIOSAMPLE
ASSAY
100 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
cell line
smooth muscle cell of the coronary artery
52
4
tissue
tibial artery
18
2
1
coronary artery
3
2
1
primary cell
endothelial cell of umbilical vein
12
2
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download