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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
54
total RNA-seq
6
DNase-seq
3
ATAC-seq
1
FAIRE-seq
Assay category
91
DNA binding
54
Transcription
10
DNA accessibility
Target of assay
56
transcription factor
33
histone
33
histone modification
21
broad histone mark
12
narrow histone mark
11
RNA binding protein
10
chromatin remodeller
Date released
56
February, 2021
36
October, 2019
27
December, 2018
15
January, 2019
12
November, 2018
3
July, 2019
3
May, 2019
2
June, 2019
1
January, 2018
Available data
182
bam
155
bigWig
141
bed narrowPeak
92
bigBed narrowPeak
60
fastq
58
tsv
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
6
tagAlign
2
hic
1
bedpe bed3+
1
tar
Organism
155
Homo sapiens
Biosample type
111
cell line
27
tissue
17
primary cell
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
222
brain
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
155
AMP
Genome assembly (visualization)
155
hg19
151
GRCh38
Lab
155
AMP-T2D consortium
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
155 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
FAIRE-seq
cell line
smooth muscle cell of the coronary artery
4
52
GM12878
54
1
tissue
tibial artery
18
2
1
coronary artery
3
2
1
primary cell
endothelial cell of umbilical vein
12
2
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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